11. – 13. June 2018

Posters

Study of GR morphs using conformal classification to define applicability domain
Agea Lorente Maria Isabel, Department of Informatics and Chemistry, UCT Prague, Prague
abstract

Genomic (un)stability in hybridogenetic clonal forms of European loaches (genus Cobitis)
Bartoš Oldřich, ÚŽFG AV ČR, v. v. i., Liběchov
abstract

StReC: Tool for Prediction of Selectivity of Steroid Receptors
Bazgier Václav, Katedra fyzikální chemie, Přírodovědecká fakulta, Univerzita Palackého v Olomouci, Olomouc
abstract

Dante - genotyping of complex and expanded short tandem repetitions
Budiš Jaroslav, Geneton s.r.o., Bratislava
abstract

Database tools and other software for the study of transposable elements
Červeňanský Michal, Institute of the Biophysics of the Czech Academy of Sciences, Brno
abstract

The speech of structural patterns
Čmelo Ivan, VŠCHT Praha, Praha 6
abstract

Approximate string matching approaches for genomic data
Cvacho Ondřej, Czech technical university in Prague, Praha
abstract

QSAR affinity fingerprints: Further exploration of chemogenomic space
Dehaen Wim, VŠCHT Praha, Praha 6
abstract

Effect of temperature on DNA structure
Dohnalová Hana, VŠCHT Praha, Praha
abstract

Efficient algorithm for compound elemental composition prediction in biological matrices
Doležalová Marie, Biologické centrum AV ČR, v. v. i., České Budějovice
abstract

Size-inferred analysis of fetal and maternal signals in noninvasive prenatal testing
Duris Frantisek, Geneton s.r.o., Bratislava
abstract

Genome-wide identification of meiotic non-crossovers in mice
Gergelits Václav, Ústav molekulární genetiky AV ČR, v. v. i., Praha 4
abstract

Variant Annotation Filtering and Prioritization
Hekel Rastislav, Geneton s.r.o., Bratislava
abstract

Prediction of protein solubility
Hon Jiří, Přírodovědecká fakulta, Masarykova Univerzita, Brno
abstract

Validation information in the Protein Data Bank: What is it and why should you care?
Horský Vladimír, CEITEC MU, Brno
abstract

Variant Calling based on CNN
Hrbek Lukáš, České vysoké učení technické v Praze, Praha 6
abstract

NGS-based methylation analysis provides insight into the epigenetic landscape of currently endogenizing mule deer gammaretrovirus
Hron Tomas, HPST, s. r. o., Praha
abstract

Protein family based 2D Diagrams of Secondary Structure Elements
Hutařová Vařeková Ivana, Masaryk University, Brno
abstract

How to predict structure of fused protein chimeras correctly?
Jarosilová Kateřina, Institute of Organic Chemistry and Biochemistry of the CAS, Prague
abstract

Framework for knowledge-based prediction of protein-protein interaction sites
Jelínek Jan, Charles University, Faculty of Mathematics and Physics, Praha 2
abstract

Real-time impedance based cell assays in bioactivity screening
Kahle Michal, Institute of Molecular Genetics of the ASCR, Prague
abstract

Detection of distinct changes in gene-expression profiles in specimens of tumours and transition zones of tenascin-positive/-negative head and neck squamous cell carcinoma
Kolář Michal, Institute of Molecular Genetics ASCR, Prague 4
abstract

Towards universal platform for protein binding site prediction
Krivák Radoslav, Univerzita Karlova - MFF, Praha 1
abstract

Analyzing holobiontic association between host and microbiota in passerines
Kubovčiak Jan, Ústav molekulární genetiky AV ČR, v. v. i., Praha
abstract

Research projects focused Laboratory Information Management System
Lichvár Michal, Geneton s.r.o., Bratislava
abstract

Genomic single rule learning with an ontology-based refinement operator
Malinka František, Czech Technical University in Prague, Praha
abstract

Interpretation of QSAR models: mining structural patterns taking into account molecular context
Matveieva Mariia, Ústav molekulární a translační medicíny Lékařská fakulta Univerzity Palackého v Olomouci, Olomouc
abstract

Automated Annotation of Secondary Structure Elements for Entire Protein Families
Midlik Adam, Masaryk University, Brno
abstract

HERVd update 2018
Moravčík Ondřej, Ústav molekulární genetiky AV ČR, v. v. i., Praha 4
abstract

ScreenX – integrated platform for collection and analysis of chemical compounds and HTS data
Müller Tomáš, Institute of Molecular Genetics of the ASCR, v. v. i., Prague
abstract

MOLEonline and ChannelsDB - Tools and Database for Analysis of Biomacromolecular Channels, Tunnels and Pores
Navrátilová Veronika, Palacký University, Olomouc, Olomouc
abstract

RepeatExplorer: Galaxy Server for In-Depth Characterization of Repetitive Sequences in Next-Generation Sequencing Data
Novák Petr, Biology Centre CAS, České Budějovice
abstract

MolMiner: an open-source tool and library for chemical entity extraction
Novotný Jiří, Institute of Molecular Genetics of the ASCR, v. v. i., Prague 4
abstract

Genomic evolution of Burkholderia cenocepacia ST32 during a decade of chronic CF infection
Nunvář Jaroslav, 2. lékařská fakulta UK, Praha
abstract

microRNA – are you real?!
Oppelt Jan, NCBR & CEITEC MU, Brno
abstract

Identification of genomic rearrangements in white blood cells of colorectal cancer patients
Ostašov Pavel, Lékařská fakulta v Plzni, Univerzita Karlova, Plzeň
abstract

Compound Management in context of employment of cheminformatic tools in practice
Popr Martin, Institute of Molecular Genetics of the ASCR, v. v. i., Prague
abstract

Does lipid metabolism affect centromeric heterochromatin function in fission yeast?
Převorovský Martin, Univerzita Karlova, Přírodovědecká fakulta, Praha 2
abstract

digIS: automated pipeline for detecting distant and novel insertion sequence elements in prokaryotes
Puterová Janka, Fakulta informačních technologií Vysoké učení technické v Brně, Brno
abstract

Empirical methods for calculation of partial atomic charges – applicability for proteins?
Raček Tomáš, Masarykova univerzita, Nový Jičín
abstract

A pipeline for ncRNA sequence reconstruction and structure characterization of potential homologs from BLAST output
Schwarz Marek, Mikrobiologický ústav AV CR, Praha
abstract

Estradiol Dimer Inhibits Tubulin Polymerization and Microtubule Dynamics
Sedlák David, IMG AVCR, Prague
abstract

FAME 2: Simple and Effective Machine Learning Model of Cytochrome P450 Regioselectivity
Šícho Martin, UCT Prague, Prague
abstract

New Developments in the Molpher-lib Chemical Space Exploration Library: algorithms, substructure locking and programming interface
Šícho Martin, UCT Prague, Prague
abstract

Sequence based classification of bacteriophage
Smoľak Dávid, Geneton s. r. o., Bratislava
abstract

Report on Evaluating Quality and Reliability of the Next Generation Sequence Data with a Mock Community
Špánek Roman, TU v Liberci, Liberec
abstract

CAVERDOCK: A New Tool for Analysis of Ligand Transport Processes in Proteins Using Molecular Docking
Štourač Jan, Masarykova Univerzita - Přírodovědecká fakulta, Brno
abstract

Connection of glycoinformatics databases with Pubchem
Suchánková Pavla, Faculty of science Masaryk University, Brno
abstract

Changes in gene expression during immortalization of haematopoietic cells
Svatoňová Petra, Institute of Molecular Genetics of the ASCR, v. v. i., Prague
abstract

Correction of force field for drug-like molecules using property map collective variable
Trapl Dalibor, University of Chemistry and Technology, Praha
abstract

Into the wild: expression and characterization of random protein libraries
Treťjačenko Vjačeslav, Charles University, Prague
abstract

SEED 2: a user-friendly tool for amplicon high-throughput sequencing data analyses
Větrovský Tomáš, Institute of Microbiology CAS, Prague
abstract

SYBA: Fragment based prediction of hard-to-synthesize structures
Voršilák Milan, Institute of Molecular Genetics of the ASCR, v. v. i., Prague 4
abstract

Effect of phosphorylation on intrinsic conformational preferences of serine, threonine and tyrosine. A computational study.
Vymětal Jiří, Ústav Organické Chemie a Biochemie AVČR, Praha 6
abstract