13. – 15. June 2022

Poster sessions

Monday, 13. June

P-01
The use of a targeted RNA sequencing-based approach for the detection of clinically relevant fusion genes in pediatric cancer patients
Al Tukmachi Dagmar, CEITEC, Masaryk University, Brno
abstract

P-03
PENGUINN-RNA: prediction of RNA G-quadruplexes using interpretable Neural Networks
Bhagat Kriti, Masaryk University
abstract

P-05
Computational method for the detection of microsatellite instability in tumor tissue samples
Budiš Jaroslav, Geneton Ltd.
abstract

P-07
Bioinformatics tools for Non-Invasive Prenatal Testing
Dohnalová Hana, GENNET, s.r.o.
abstract

P-09
Paperfly: ab initio binding site reconstruction
Faltejsková Kateřina, Ústav organické chemie a biochemie AV ČR
abstract

P-11
Accessing chemical and biological datasets through SPARQL endpoints
Galgonek Jakub, Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences
abstract

P-13
Genomic Benchmarks: A Collection of Datasets for Genomic Sequence Classification
Grešová Katarína, CEITEC-MU
abstract

P-15
Mining data from sweet cherry resequencing
Holušová Kateřina, Institute of Experimental Botany AS CR, v. v. i.
abstract

P-17
Can structural information help with phosphorylation prediction?
Kiefl Yannick, Ludwigs Maximilians University, Technical University of Munich, Charles University
abstract

P-19
Reproducible PDX Genomic Data Analysis
Křenek Aleš, CESNET
abstract

P-21
Decoding differentially expressed genes in artificial light at night (ALAN) induced zebrafish ovary and development of a possible major lifestyle diseases gene signature
Labala Rajendra, Institute of Molecular Genetics of the Czech Academy of Sciences
abstract

P-23
scdrake: a reproducible and scalable pipeline for scRNA-seq data analysis
Novotný Jiří, Institute of Molecular Genetics of the Czech Academy of Sciences
abstract

P-25
Exosomes produced by melanoma cells significantly influence the biological properties of normal and cancer-associated fibroblasts
Pfeiferová Lucie, IMG, Laboratory of Genomics and Bioinformatics
abstract

P-27
QM-like partial atomic charges for AlphaFold available online
Schindler Ondřej, Masaryk University
abstract

P-29
Measures of quality of clusters in hierarchical clustering of flow cytometry data
Sieger Tomáš, ČVUT v Praze, Fakulta elektrotechnická
abstract

P-31
Combination of expert decision systems with artificial intelligence leads to superior accuracy of automated prediction of clinical effect of copy number variation
Sládeček Tomáš, Geneton
abstract

P-33
PredictSNP ONCO: A Web Server for Rapid Structural Bioinformatics Analysis of the Effect of Cancer-associated Mutations
Štourač Jan, Mezinárodní centrum klinického výzkumu Fakultní nemocnice u sv. Anny v Brně
abstract

P-35
Analysis of sequencing data from reprogramming of immortalized cell line
Svatoňová Petra, Institute of Molecular Genetics
abstract

P-37
Bioinformatic pipeline for comprehensive analysis of various small RNAs through RNA sequencing
Trachtova Karolina, CEITEC
abstract

P-39
AHoJ: rapid, tailored search and retrieval of apo and holo protein structures
Feidakis Christos, Charles University, Faculty of Science
abstract

Tuesday, 14. June

P-02
Detection of tail fibre proteins via machine learning methods
Baláž Andrej, Geneton s.r.o.
abstract

P-04
Bioinformatics workflow for reliable detection of SARS-CoV-2 variants in wastewater data generated by massively parallel sequencing
Böhmer Miroslav, Comenius University Science Park
abstract

P-06
Mining novel terpene synthases from large-scale sequence repositories
Čalounová Tereza, Ústav organické chemie a biochemie AV ČR
abstract

P-08
ExP Heatmap: visualization of high-dimensional pairwise genomic data
Ehler Edvard, Ústav molekulární genetiky AV ČR, v. v. i.
abstract

P-10
Formalized machine-assisted flow cytometry immunophenotyping
Fišer Karel, Second Faculty of Medicine, Charles University, Prague, Czech Republic
abstract

P-12
miRBind: a Deep Learning method for miRNA binding classification
Giassa Ilektra-Chara, CEITEC Masaryk University
abstract

P-14
Diversity and transcriptome analysis of the maize B chromosome
Hloušková Lucie, Institute of Experimental Botany AS CR, v. v. i.
abstract

P-16
NanoLuc luciferase may not be as "nano" as thought
Horáčková Jana, Masaryk University
abstract

P-18
Comparison of characteristics of cfDNA fragments between patients with severe SARS-COV-2 infection and healthy control group
Krampl Werner, Geneton s.r.o.
abstract

P-20
PrankWeb3 - binding site predictions for experimental and predicted protein structures
Krivak Radoslav, Charles University
abstract

P-22
HCV IRES Secondary Structure Search in Human 5'UTRs
Le Anh Vu, Czech Technical University
abstract

P-24
Investigating the Interaction Between Human DHX15 Helicase and Viral G-Patch Domain Within the Virions of Mason-Pfizer Monkey Virus Using UV Crosslinking and Immunoprecipitation
Pavlů Anna, UCT Prague
abstract

P-26
Atomic Charge Calculator II – a web service for calculating partial atomic charges
Raček Tomáš, CEITEC Masarykova Univerzita
abstract

P-28
Exploring possibility of reusing LIGR-seq datasets for biological data supported RNA secondary structure prediction
Schwarz Marek, Institute of Microbiology
abstract

P-30
Probes & Drugs Portal in 2022: A Hub for the Integration of High-quality Bioactive Compound Sets
Škuta Ctibor, IMG CAS
abstract

P-32
Exploring the possibilities of formulation the rules for permeation enhancement
Storchmannová Kateřina, Palacký University in Olomouc
abstract

P-34
NextDOM 2.0: Detector of Somatic Point Mutations in Leukemias Resistant to Therapy
Suchánková Pavla, Ústav Hematologie a krevní transfuze
abstract

P-36
Analysis of Molecular Simulation by adversarial Autoencoder
Tedeschi Guglielmo, University of Chemistry and Technology
abstract

P-38
European Chemical Biology Database
Voršilák Milan, CZ-OPENSCREEN, IMG, CAS
abstract