13. – 15. June 2022

Posters

The use of a targeted RNA sequencing-based approach for the detection of clinically relevant fusion genes in pediatric cancer patients
Al Tukmachi Dagmar, CEITEC, Masaryk University, Brno
abstract

Detection of tail fibre proteins via machine learning methods
Baláž Andrej, Geneton s.r.o.
abstract

PENGUINN-RNA: prediction of RNA G-quadruplexes using interpretable Neural Networks
Bhagat Kriti, Masaryk University
abstract

Bioinformatics workflow for reliable detection of SARS-CoV-2 variants in wastewater data generated by massively parallel sequencing
Böhmer Miroslav, Comenius University Science Park
abstract

Computational method for the detection of microsatellite instability in tumor tissue samples
Budiš Jaroslav, Geneton Ltd.
abstract

Mining novel terpene synthases from large-scale sequence repositories
Čalounová Tereza, Ústav organické chemie a biochemie AV ČR
abstract

Bioinformatics tools for Non-Invasive Prenatal Testing
Dohnalová Hana, GENNET, s.r.o.
abstract

ExP Heatmap: visualization of high-dimensional pairwise genomic data
Ehler Edvard, Ústav molekulární genetiky AV ČR, v. v. i.
abstract

Paperfly: ab initio binding site reconstruction
Faltejsková Kateřina, Ústav organické chemie a biochemie AV ČR
abstract

AHoJ: rapid, tailored search and retrieval of apo and holo protein structures
Feidakis Christos, Charles University, Faculty of Science
abstract

Formalized machine-assisted flow cytometry immunophenotyping
Fišer Karel, Second Faculty of Medicine, Charles University, Prague, Czech Republic
abstract

Accessing chemical and biological datasets through SPARQL endpoints
Galgonek Jakub, Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences
abstract

miRBind: a Deep Learning method for miRNA binding classification
Giassa Ilektra-Chara, CEITEC Masaryk University
abstract

Genomic Benchmarks: A Collection of Datasets for Genomic Sequence Classification
Grešová Katarína, CEITEC-MU
abstract

Diversity and transcriptome analysis of the maize B chromosome
Hloušková Lucie, Institute of Experimental Botany AS CR, v. v. i.
abstract

Mining data from sweet cherry resequencing
Holušová Kateřina, Institute of Experimental Botany AS CR, v. v. i.
abstract

NanoLuc luciferase may not be as "nano" as thought
Horáčková Jana, Masaryk University
abstract

Can structural information help with phosphorylation prediction?
Kiefl Yannick, Ludwigs Maximilians University, Technical University of Munich, Charles University
abstract

Comparison of characteristics of cfDNA fragments between patients with severe SARS-COV-2 infection and healthy control group
Krampl Werner, Geneton s.r.o.
abstract

Reproducible PDX Genomic Data Analysis
Křenek Aleš, CESNET
abstract

PrankWeb3 - binding site predictions for experimental and predicted protein structures
Krivak Radoslav, Charles University
abstract

Decoding differentially expressed genes in artificial light at night (ALAN) induced zebrafish ovary and development of a possible major lifestyle diseases gene signature
Labala Rajendra, Institute of Molecular Genetics of the Czech Academy of Sciences
abstract

HCV IRES Secondary Structure Search in Human 5'UTRs
Le Anh Vu, Czech Technical University
abstract

scdrake: a reproducible and scalable pipeline for scRNA-seq data analysis
Novotný Jiří, Institute of Molecular Genetics of the Czech Academy of Sciences
abstract

Investigating the Interaction Between Human DHX15 Helicase and Viral G-Patch Domain Within the Virions of Mason-Pfizer Monkey Virus Using UV Crosslinking and Immunoprecipitation
Pavlů Anna, UCT Prague
abstract

Exosomes produced by melanoma cells significantly influence the biological properties of normal and cancer-associated fibroblasts
Pfeiferová Lucie, IMG, Laboratory of Genomics and Bioinformatics
abstract

Atomic Charge Calculator II – a web service for calculating partial atomic charges
Raček Tomáš, CEITEC Masarykova Univerzita
abstract

QM-like partial atomic charges for AlphaFold available online
Schindler Ondřej, Masaryk University
abstract

Exploring possibility of reusing LIGR-seq datasets for biological data supported RNA secondary structure prediction
Schwarz Marek, Institute of Microbiology
abstract

Measures of quality of clusters in hierarchical clustering of flow cytometry data
Sieger Tomáš, ČVUT v Praze, Fakulta elektrotechnická
abstract

Probes & Drugs Portal in 2022: A Hub for the Integration of High-quality Bioactive Compound Sets
Škuta Ctibor, IMG CAS
abstract

Combination of expert decision systems with artificial intelligence leads to superior accuracy of automated prediction of clinical effect of copy number variation
Sládeček Tomáš, Geneton
abstract

Exploring the possibilities of formulation the rules for permeation enhancement
Storchmannová Kateřina, Palacký University in Olomouc
abstract

PredictSNP ONCO: A Web Server for Rapid Structural Bioinformatics Analysis of the Effect of Cancer-associated Mutations
Štourač Jan, Mezinárodní centrum klinického výzkumu Fakultní nemocnice u sv. Anny v Brně
abstract

NextDOM 2.0: Detector of Somatic Point Mutations in Leukemias Resistant to Therapy
Suchánková Pavla, Ústav Hematologie a krevní transfuze
abstract

Analysis of sequencing data from reprogramming of immortalized cell line
Svatoňová Petra, Institute of Molecular Genetics
abstract

Analysis of Molecular Simulation by adversarial Autoencoder
Tedeschi Guglielmo, University of Chemistry and Technology
abstract

Bioinformatic pipeline for comprehensive analysis of various small RNAs through RNA sequencing
Trachtova Karolina, CEITEC
abstract

European Chemical Biology Database
Voršilák Milan, CZ-OPENSCREEN, IMG, CAS
abstract